Undergraduate Publications – 2004

Names of undergraduate students from Brandeis are indicated below in bold face

  1. Zhang Y, Heinsen MH, Kostic M, Pagani GM, Riera TV, Perovic I, Hedstrom L, Snider BB, Pochapsky TC. Analogs of 1-phosphonooxy-2,2-dihydroxy-3-oxo-5-(methylthio)pentane, an acyclic intermediate in the methionine salvage pathway: a new preparation and characterization of activity with E1 enolase/phosphatase from Klebsiella oxytoca. Bioorg Med Chem. 2004;12(14):3847-55.
  2. Wolf-Watz M, Thai V, Henzler-Wildman K, Hadjipavlou G, Eisenmesser EZ, Kern D. Linkage between dynamics and catalysis in a thermophilic-mesophilic enzyme pair. Nat Struct Mol Biol. 2004.
  3. Wilson MA, Amour CV, Collins JL, Ringe D, Petsko GA. The 1.8-A resolution crystal structure of YDR533Cp from Saccharomyces cerevisiae: A member of the DJ-1/ThiJ/PfpI superfamily. Proc Natl Acad Sci U S A. 2004;101(6):1531-6.
  4. Tolic-Norrelykke SF, Engh AM, Landick R, Gelles J. Diversity in the rates of transcript elongation by single RNA polymerase molecules. Journal of Biological Chemistry. 2004;279(5):3292-9.
  5. Otmakhov N, Tao-Cheng JH, Carpenter S, Asrican B, Dosemeci A, Reese TS, et al. Persistent accumulation of calcium/calmodulin-dependent protein kinase II in dendritic spines after induction of NMDA receptor-dependent chemical long-term potentiation. J Neurosci. 2004;24(42):9324-31.
  6. Otmakhov N, Khibnik L, Otmakhova N, Carpenter S, Riahi S, Asrican B, et al. Forskolin-induced LTP in the CA1 hippocampal region is NMDA receptor dependent. J Neurophysiol. 2004;91(5):1955-62.
  7. Moseley JB, Sagot I, Manning AL, Xu Y, Eck MJ, Pellman D, et al. A conserved mechanism for Bni1- and mDia1-induced actin assembly and dual regulation of Bni1 by Bud6 and profilin. Mol Biol Cell. 2004;15(2):896-907. [full text in PubMed Central]
  8. McLean JE, Hamaguchi N, Belenky P, Mortimer SE, Stanton M, Hedstrom L. Inosine 5′-monophosphate dehydrogenase binds nucleic acids in vitro and in vivo. Biochem J. 2004;379(Pt 2):243-51.
  9. Mattila PK, Quintero-Monzon O, Kugler J, Moseley JB, Almo SC, Lappalainen P, et al. A high-affinity interaction with ADP-actin monomers underlies the mechanism and in vivo function of Srv2/cyclase-associated protein. Mol Biol Cell. 2004;15(11):5158-71.
  10. Malkova A, Swanson J, German M, McCusker JH, Housworth EA, Stahl FW, et al. Gene conversion and crossing over along the 405-kb left arm of Saccharomyces cerevisiae chromosome VII. Genetics. 2004;168(1):49-63.
  11. Mahadevan A, Lappe J, Rhyne RT, Cruz-Bermudez ND, Marder E, Goy MF. Nitric oxide inhibits the rate and strength of cardiac contractions in the lobster Homarus americanus by acting on the cardiac ganglion. J Neurosci. 2004;24(11):2813-24.
  12. Guillen Schlippe YV, Riera TV, Seyedsayamdost MR, Hedstrom L. Substitution of the conserved Arg-Tyr Dyad selectively disrupts the hydrolysis phase of the IMP dehydrogenase reaction. Biochemistry. 2004;43(15):4511-21.
  13. McKinney RA, Glatt SM, Williams SR. Allometric length-weight relationships for benthic prey of aquatic wildlife in coastal marine habitats. Wildlife Biology. 2004;10(4):241-9.

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